Proposition 58.15.2. Let f : X \to S be a flat proper morphism of finite presentation whose geometric fibres are connected and reduced. Assume S is connected and let \overline{s} be a geometric point of S. Then there is an exact sequence
\pi _1(X_{\overline{s}}) \to \pi _1(X) \to \pi _1(S) \to 1
of fundamental groups.
Proof.
Let Y \to X be a finite étale morphism. Consider the Stein factorization
\xymatrix{ Y \ar[d] \ar[r] & X \ar[d] \\ T \ar[r] & S }
of Y \to S. By Lemma 58.15.1 the morphism T \to S is finite étale. In this way we obtain a functor \textit{FÉt}_ X \to \textit{FÉt}_ S. For any finite étale morphism U \to S a morphism Y \to U \times _ S X over X is the same thing as a morphism Y \to U over S and such a morphism factors uniquely through the Stein factorization, i.e., corresponds to a unique morphism T \to U (by the construction of the Stein factorization as a relative normalization in More on Morphisms, Lemma 37.53.1 and factorization by Morphisms, Lemma 29.53.4). Thus we see that the functors \textit{FÉt}_ X \to \textit{FÉt}_ S and \textit{FÉt}_ S \to \textit{FÉt}_ X are adjoints. Note that the Stein factorization of U \times _ S X \to S is U, because the fibres of U \times _ S X \to U are geometrically connected.
By the discussion above and Categories, Lemma 4.24.4 we conclude that \textit{FÉt}_ S \to \textit{FÉt}_ X is fully faithful, i.e., \pi _1(X) \to \pi _1(S) is surjective (Lemma 58.4.1).
It is immediate that the composition \textit{FÉt}_ S \to \textit{FÉt}_ X \to \textit{FÉt}_{X_{\overline{s}}} sends any U to a disjoint union of copies of X_{\overline{s}}. Hence \pi _1(X_{\overline{s}}) \to \pi _1(X) \to \pi _1(S) is trivial by Lemma 58.4.2.
Let Y \to X be a finite étale morphism with Y connected such that Y \times _ X X_{\overline{s}} contains a connected component Z isomorphic to X_{\overline{s}}. Consider the Stein factorization T as above. Let \overline{t} \in T_{\overline{s}} be the point corresponding to the fibre Z. Observe that T is connected (as the image of a connected scheme) and by the surjectivity above T \times _ S X is connected. Now consider the factorization
\pi : Y \longrightarrow T \times _ S X
Let \overline{x} \in X_{\overline{s}} be any closed point. Note that \kappa (\overline{t}) = \kappa (\overline{s}) = \kappa (\overline{x}) is an algebraically closed field. Then the fibre of \pi over (\overline{t}, \overline{x}) consists of a unique point, namely the unique point \overline{z} \in Z corresponding to \overline{x} \in X_{\overline{s}} via the isomorphism Z \to X_{\overline{s}}. We conclude that the finite étale morphism \pi has degree 1 in a neighbourhood of (\overline{t}, \overline{x}). Since T \times _ S X is connected it has degree 1 everywhere and we find that Y \cong T \times _ S X. Thus Y \times _ X X_{\overline{s}} splits completely. Combining all of the above we see that Lemmas 58.4.3 and 58.4.5 both apply and the proof is complete.
\square
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