Lemma 108.9.4. Assume the geometric fibres of X \to B are integral in addition to the other assumptions in this section. Then \mathrm{Pic}_{X/B} \to B is separated.
Proof. Since \mathrm{Pic}_{X/B} \to B is quasi-separated, it suffices to check the uniqueness part of the valuative criterion, see Morphisms of Spaces, Lemma 67.43.2. This immediately reduces to the following problem: given
a valuation ring R with fraction field K,
an algebraic space X proper and flat over R with integral geometric fibre,
an element a \in \mathrm{Pic}_{X/R}(R) with a|_{\mathop{\mathrm{Spec}}(K)} = 0,
then we have to prove a = 0. Applying Morphisms of Stacks, Lemma 101.25.6 to the surjective flat morphism \mathcal{P}\! \mathit{ic}_{X/R} \to \mathrm{Pic}_{X/R} (surjective and flat by Lemma 108.9.1 and Morphisms of Stacks, Lemma 101.28.8) after replacing R by an extension we may assume a is given by an invertible \mathcal{O}_ X-module \mathcal{L}. Since a|_{\mathop{\mathrm{Spec}}(K)} = 0 we find \mathcal{L}_ K \cong \mathcal{O}_{X_ K} by Quot, Lemma 99.11.3.
Denote f : X \to \mathop{\mathrm{Spec}}(R) the structure morphism. Let \eta , 0 \in \mathop{\mathrm{Spec}}(R) be the generic and closed point. Consider the perfect complexes K = Rf_*\mathcal{L} and M = Rf_*(\mathcal{L}^{\otimes -1}) on \mathop{\mathrm{Spec}}(R), see Derived Categories of Spaces, Lemma 75.25.4. Consider the functions \beta _{K, i}, \beta _{M, i} : \mathop{\mathrm{Spec}}(R) \to \mathbf{Z} of Derived Categories of Spaces, Lemma 75.26.1 associated to K and M. Since the formation of K amd M commutes with base change (see lemma cited above) we find \beta _{K, 0}(\eta ) = \beta _{M, 0}(\beta ) = 1 by Spaces over Fields, Lemma 72.14.3 and our assumption on the fibres of f. By upper semi-continuity we find \beta _{K, 0}(0) \geq 1 and \beta _{M, 0} \geq 1. By Spaces over Fields, Lemma 72.14.4 we conclude that the restriction of \mathcal{L} to the special fibre X_0 is trivial. In turn this gives \beta _{K, 0}(0) = \beta _{M, 0} = 1 as above. Then by More on Algebra, Lemma 15.75.6 we can represent K by a complex of the form
Now R \to R^{\oplus \beta _{K, 1}(0)} is zero because \beta _{K, 0}(\eta ) = 1. In other words K = R \oplus \tau _{\geq 1}(K) in D(R) where \tau _{\geq 1}(K) has tor amplitude in [1, b] for some b \in \mathbf{Z}. Hence there is a global section s \in H^0(X, \mathcal{L}) whose restriction s_0 to X_0 is nonvanishing (again because formation of K commutes with base change). Then s : \mathcal{O}_ X \to \mathcal{L} is a map of invertible sheaves whose restriction to X_0 is an isomorphism and hence is an isomorphism as desired. \square
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